CDS

Accession Number TCMCG051C30448
gbkey CDS
Protein Id XP_024466049.1
Location complement(join(11583028..11583186,11583585..11583752,11584550..11584672,11585546..11585795,11587032..11587138,11588781..11588970,11589373..11590028,11591314..11591663,11592365..11592491,11592630..11592743,11592835..11593344))
Gene LOC18102525
GeneID 18102525
Organism Populus trichocarpa

Protein

Length 917aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024610281.1
Definition alpha-amylase 3, chloroplastic isoform X1 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category G
Description alpha-amylase 3
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0000272        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004553        [VIEW IN EMBL-EBI]
GO:0004556        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005975        [VIEW IN EMBL-EBI]
GO:0005976        [VIEW IN EMBL-EBI]
GO:0005982        [VIEW IN EMBL-EBI]
GO:0005983        [VIEW IN EMBL-EBI]
GO:0005984        [VIEW IN EMBL-EBI]
GO:0005985        [VIEW IN EMBL-EBI]
GO:0005987        [VIEW IN EMBL-EBI]
GO:0006073        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009251        [VIEW IN EMBL-EBI]
GO:0009311        [VIEW IN EMBL-EBI]
GO:0009313        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009532        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009570        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016052        [VIEW IN EMBL-EBI]
GO:0016160        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016798        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044042        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044247        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044262        [VIEW IN EMBL-EBI]
GO:0044264        [VIEW IN EMBL-EBI]
GO:0044275        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046352        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCGGCAGTTAGCGTAGAGCCTTTCCTTCGATACTCTCGCTTTGAAAAGCCCGGATATGCTCGTAGCAGGAGAAAGGCTGCTATAACTGTCACTACTGCTGCTCTCATCAAATCTCCTTCGTCTTTTAATTGTTGCTGTTCACTAATACCAAGACGAAAACTCCTGTCAAATGCCTCCTACTTCCCTTTTCTTGACCTTCATAGGGTCAAAACCCACACGGCTAGAGCTAGCTCCACCGATACGGCTCTTGTTGAGTCCACTAATGATGTCGTATTCAAAGAGACCTTCCCTCTTTCGCGTACTGAAATGACTGAAGGAAAGATTTTTGTAAGATTAGATCAGAGTAAGGCCAAGGAGAAGGAGGATCAATGGCAGCAGCTTACTGTAGGGTGTAGCCTTCCAGGGAAATGGATTCTTCATTGGGGTGTTTCTTATCTCGACGATACTGGTAGTGAATGGGATCAACCTCCTGAGAATATGAGACCCCCTGGTTCGATTCCTGTAAAGGACTATGCCATAGAGACGCCGTTAAAGAAGGCATCAGAAGGAGATAAGTTTCACCAAGTGAAGATTGGGATTGATCCCAAAAGTCCGGTTGCAGCCCTGAATTTTGTTTTGAAGGATGAAGAAACTGGAGTTTGGTATCAGCACAAAGGGAGAGATTTCAAGGTGCCTCTTGTGGACTGCTTGCTCGATTCTGGCGGTGGAAACGTCATAGGAGCAAAGGGGGGCTTTAGTATGTGGCCAGGGGCAATGCTTTCTAACATGTTCCTCAAAGCAGATGCATTGGCTTCTGAAGGTAAAGATAGCAGCAGCAGATCCAAAGACCCTAAACAAGAAACTAGGAAGGTAGAAGGATTCTATGAAGAGCTGCCTATTGCTAAATTTGCCGTGATTGAAAACTCAGTGACTGTTTCAGTTATCAAGTGTCTCAAGACAGCCAAGAATCTTCTCTATTTAGTAACTGATCTACCTGGAGAAGTTGTTGTTCACTGGGGAGTTTGCAGAGATGATGCTAAAAAATGGGAAATTCCAGCTGCTCCACATCCACCAGAAACAACTGTGTTTAAGAACAAGGCTTTGCGGACTGTGCTACAGGCAAAAGAGGATGGAAATGGACGTTCAGGGTCATTTACTTTGGACGAAGACCTTGTAGGCTTCCTTTTCGTTCTCAAGCTAAATGATAGCACTTGGTTGAATTGTATGGGAAATGATTTCTATATCGCTCTCCCAATCTCAAGTAGCATTCCTGCTCTATCAGGAGCCGGACAATCTGAAGTTGCACCAGTATCTGAAAACACTGTAGGAGCAGATCAAGAAGTTTCTCATGCTATATATACTGATGGTATAATTAATGAAATACGGAGCTTAGTTAGTGACTTTTCCTCTGAGAAGAGACAGAAGACAAAAACAAAAGAAGCACAAGAAAGCATTCTCCAAGAAATTGAAAAATTGGCTGCTGAAGCATACAGTATCTTCAGAAGCTCAATTCCAACTTTTCTGGATGAAACTGCTCTGGAATCCGAGGCAACAGAGGCTCCTAAAATATGCTCAGGAACTGGCACTGGTCATGAAATATTGCTCCAAGGTTTTAATTGGGAATCCCATAAATTGGGACATTGGTACATGGAGCTAAAACAAAAAATTGAAGAAATATCATCCCTTGGATTCACTGTGGTTTGGTTGCCCCCACCAACAGAATCTGTGTCACCTGAAGGTTACATGCCAAAAGATTTGTATAATCTTAACTCCAGATATGGAAATATTGATGAGCTGAAGGATCTTGTGAAGAGATTCCATGGAAAGGGTGTTAAAGTTCTTGGAGATGCTGTTTTGAACCATCGTTGTGCACACTACAAGAATGGGAATGGTGTATGGAATATTTTTGGAGGCCGCTTGAATTGGGATGACCGGGCAGTTGTTGCAGACGATCCACATTTTCAGGGTAGGGGAAACAAAAGTAGTGGAGATAATTTTCATGCTGCCCCAAACATTGATCATTCACAAGAATTTGTAAGAAAGGATCTCAAAGAATGGTTACTCTGGCTAAGAAAAGAGATCGGGTATGATGGATGGAGGCTTGATTTTGTGAGAGGATTTTGGGGTGGTTATGTGAAGGATTACTTGGATGCAAGTGAACCTTATTTTGCTGTTGGTGAGTATTGGGATTCCCTCAGTTATACATACGGTGAATTGGATCACGATCAAGATGCACATCGGCAGAGAATTGTTGACTGGATTAATGCCACCAGTGGGACTGCTGGTGCATTTGATGTCACCACAAAAGGGATTCTTCATACGACACTGGAAAGGTGCGAGTATTGGCGATTATCAGATCAGAAAGGAAAGCCTCCTGGGGTTGTCGGATGGTGGCCATCTCGTGCTGTTACCTTCATAGAGAATCATGACACTGGTTCTACCCAGGGTCATTGGAGATTTCCCAGTGGAAAAGAAATGCAAGGATATGCTTACATCTTGACTCATCCAGGAACACCAGCAGTGTTCTATGATCACATATTTTCTCATTATCAATCTGAAATCGCAGCTCTCATCTCTCTAAGAAACCGGAACAAAATCCACTGTCGGAGCACTGTTAAAATTACCAAGGCGGAGAGGGATGTGTACGCGGCCATCATTGATGAGAAAGTGGCGGTGAAAATTGGACCGGGTCATTACGAACCGCCAAGTGGGCCCTACAGTTGGTCTTCAAAAATCGAAGGGAGGAATTACAAGGTCTGGGAAGCATCTTAA
Protein:  
MSAVSVEPFLRYSRFEKPGYARSRRKAAITVTTAALIKSPSSFNCCCSLIPRRKLLSNASYFPFLDLHRVKTHTARASSTDTALVESTNDVVFKETFPLSRTEMTEGKIFVRLDQSKAKEKEDQWQQLTVGCSLPGKWILHWGVSYLDDTGSEWDQPPENMRPPGSIPVKDYAIETPLKKASEGDKFHQVKIGIDPKSPVAALNFVLKDEETGVWYQHKGRDFKVPLVDCLLDSGGGNVIGAKGGFSMWPGAMLSNMFLKADALASEGKDSSSRSKDPKQETRKVEGFYEELPIAKFAVIENSVTVSVIKCLKTAKNLLYLVTDLPGEVVVHWGVCRDDAKKWEIPAAPHPPETTVFKNKALRTVLQAKEDGNGRSGSFTLDEDLVGFLFVLKLNDSTWLNCMGNDFYIALPISSSIPALSGAGQSEVAPVSENTVGADQEVSHAIYTDGIINEIRSLVSDFSSEKRQKTKTKEAQESILQEIEKLAAEAYSIFRSSIPTFLDETALESEATEAPKICSGTGTGHEILLQGFNWESHKLGHWYMELKQKIEEISSLGFTVVWLPPPTESVSPEGYMPKDLYNLNSRYGNIDELKDLVKRFHGKGVKVLGDAVLNHRCAHYKNGNGVWNIFGGRLNWDDRAVVADDPHFQGRGNKSSGDNFHAAPNIDHSQEFVRKDLKEWLLWLRKEIGYDGWRLDFVRGFWGGYVKDYLDASEPYFAVGEYWDSLSYTYGELDHDQDAHRQRIVDWINATSGTAGAFDVTTKGILHTTLERCEYWRLSDQKGKPPGVVGWWPSRAVTFIENHDTGSTQGHWRFPSGKEMQGYAYILTHPGTPAVFYDHIFSHYQSEIAALISLRNRNKIHCRSTVKITKAERDVYAAIIDEKVAVKIGPGHYEPPSGPYSWSSKIEGRNYKVWEAS